Program in Bioinformatics & Proteomics/Genomics

Syllabus:  Microarray Data Analysis BIPG 5500/7500

BIPG5500/7500 MICROARRAY DATA ANALYSIS

Summer 1 = 1cr
Course Director: Sadik Khuder, PhD.

COURSE DESCRIPTION

This course aims at providing on-hand training on analysis of microarray data.  Students will learn how to handle and analyze microarray data.  Topics covered include preprocessing, identifying differentially expressed genes, classification and presentation of findings.  Different platforms of microarray technologies will be covered in this course.

SYLLABUS

Lecture 1          (1 hour)            Microarray technologies
Lab #1             (2 hours)           Microarray data acquisition

Lecture 2          (1 hour)            Preprocessing microarray data
Lab #2             (2 hours)         

Lecture 3          (1 hour)            Identifying differentially expressed genes
Lab #3             (2 hours)

Lecture 4          (1 hour)            Annotation
Lab #4             (2 hours)           Multivariate techniques

Lab #5             (3 hours)           Putting all together / assigned real microarray data sets 


For the most part, this course will be offered in Distance Learning format.
Last Updated: 3/22/15