The University of Toledo

Recent Publications

Publications co-authored by, or citing BPG faculty/staff:

Cheng X, Blumenthal RM. Coordinated chromatin control: structural and functional linkage of DNA and histone methylation. Biochemistry 2010 Apr 13: 49(14): 2999-3008.

Zhang J, Gonit M, D’Alincourt Salazar M, Shatnawi A, Shemshedini L, Trumbly R, Ratnam M. C/EBPalpha redirects androgen receptor signaling through a unique bimodal interaction.  Oncogene 2010, 29:723-38.

Tang H, Park S, Sun SC, Trumbly R, Ren G, Tsung E, Yeung KC. RKIP inhibits NF-kappaB in cancer cells by regulating upstream signaling components of the IkappaB kinase complex. FEBS Lett. 2010, 584:662-8.

Mikho-Szkudlarek M, and Chin KV. “Inhibition of adipogenesis by prieurianin mediated by the transcriptional repressor Zfp68" submitted, 2010.

Shao Q, and Chin KV. “Corn products consumption and the rising trends in obesity”, submitted, 2010.

Saladi SV, Keenen B, Marathe HG, Qi H, Chin KV, de la Serna IL. “Modulation of extracellular matrix/adhesion molecule expression by BRG1 is associated with increased melanoma invasiveness”, submitted, 2010.

Qasem A, Saunders RA, Szkudlarek M, Chin AJB, Bosio R, Wu Q, Fujii K, Shapiro J, Beauchemin N, Najjar S, and Chin KV. “Dual mechanistic anorexigenic and anti-adipogenic therapeutic for the treatment of obesity”, submitted, 2010.

Saunders RA, Fuji K, Alabanza L, Ravatn R, Kita T, Kudoh K, and Chin KV. “Induction of the Phospholipid Transfer Protein Gene Expression by Topoisomerase I Inhibitors”, Biochem. Pharm., in press, 2010.

Nestor Kalinoski AL, Ramdath RS, Langenderfer KM, Sikanderkhel S, DeRaedt S, Welch M, Park J, Pringle T, Joe B, Cicila GT, Allison DC.  Neointimal hyperplasia and vasoreactivity are controlled by genetic elements on rat chromosome 3. Hypertension 2010, 55(2):555-56

Mruk I, Blumenthal RM. Tuning the relative affinities for activating and repressing operators of a temporally regulated restriction-modification system. Nucleic Acids Res.2009, 37: 983-998.

Blumenthal RM, Cheng X. Structural and biochemical advances in mammalian DNA methylation. In: Epigenomics (Ferguson-Smith, A.C., Greally, J.M., and Martienssen, R.A., eds.). 2009, New York: Springer. pp. 85-100; 438 pp. 

Cicila, GT, Morgan EE, Lee SJ, Farms P, Yerga-Woolwine S, Toland EJ, Ramdath RS, Gopalakrishnan K, Bohman K, Nestor-Kalinoski A, Khuder SA, Joe B. Identification of epistatic genetic determinants of blood pressure and mortality in a rat model of salt-sensitive hypertension. Hypertension 2009, 53(4):725-732.

Szkudlarek M, Bosio R, Kudoh Alabanza L, and Chin K-V.  "Interaction of the regulatory subunit of the cAMP-Dependent Protein Kinase with PATZ1 (ZNF278)", Biochem. Biophy. Res. Commun., 2010, 391:1318-1323.

Yang W-L, Ravatn R, Kudoh Alabanza L, and Chin K-V. "Interaction of the regulatory subunit of the cAMP-Dependent Protein Kinase with PATZ1 (ZNF278)", Biochem. Biophy. Res. Commun., 2010, 391:1318-1323.

Jankun J, Aleem A, Selman SH, Basrur V, Skrzypczak-Jankun E. VLHL plasminogen activator inhibitor spontaneously reactivates from the latent to active form, International Journal of Molecular Medicine, 2009, 23(1), 57-63, (on the cover).

Jankun J, Skrzypczak-Jankun E. Yin and Yang of the plasminogen activator inhibitor. Pol Archives of Internal Medicine, 2009, 119(6):410-417.

Jankun J, Aleem AM, Struniawski R, Lysiak-Szydlowska W, Selman SH, Skrzypczak-Jankun E. Accelerated Thrombus Lysis in the blood of plasminogen activator inhibitor deficient mice is inhibited by PAI-1 with a very long half-life. Pharmacological Reports, 2009, 61(4): 673-80.

Ansari M, Aleem AM, Wells L, Jankun J, Walther M. Kühn H, Reinartz J, Skrzypczak-Jankun E. Human platelet 12-lipoxygenase: Naturally occurring Q261/R261 variants and N544L mutant show altered activity but unaffected substrate binding and membrane association behavior. International Journal of Molecular Medicine, 2009, 24(6):759-64.

Jankun J, Selman SH, Keck RW, Lysiak-Szydłowska W, Skrzypczak-Jankun E. Very long half-life plasminogen activator inhibitor Type 1 reduces bleeding in a mouse model. British Journal Urology Int., 2009, Nov 13. [Epub ahead of print]

Ilikchyan, IN, McKay RML, Zehr JP, Dyhrman ST, Bullerjahn GS.  Detection and expression of the phosphonate transporter gene phnD in marine and freshwater picocyanobacteria.  Environ. Microbiol. 2009, 11:1314-132.

Sharma AK, Sommerfeld K, Bullerjahn GS, Matteson A, Wilhelm SW, Jezbera J, Brandt U, Doolittle WF, Hahn MW.  Widespread distribution of actinorhodopsin genes in freshwater habitats and among diverse actinobacterial lineages.  ISME J. 2009, 3: 726-737.

D'Elia T, Veerapaneni R, Theraisnathan V, Rogers SO.  Isolation of fungi from Lake Vostok accretion ice. Mycologia 1 2009, 01:751-763.

Hassler CS, Havens SM, Bullerjahn GS, McKay RML, Twiss MR.  An evaluation of iron bioavailability and speciation in western Lake Superior with the use of combined physical, chemical, and biological assessment. Limnol. Oceanogr. 2009, 54: 987-1001.

Zirbel CL, Sponer JE, Sponer J, Stombaugh J, Leontis NB. Classification and energetics of the base-phosphate interactions in RNA.  Nucleic Acids Res. 2009 Aug;37(15):4898-918. Epub 2009, Jun 14.

Stombaugh J, Zirbel CL, Westhof E, Leontis NB. Frequency and isostericity of RNA base pairs. Nucleic Acids Res. 2009, Apr;37(7):2294-312. Epub 2009, Feb 24.

Cheng X, Blumenthal RM.  Mammalian DNA methyltransferases: a structural perspective. Structure 2008, 16: 341-350.
 
Mruk I, Blumenthal RM.  Real-time kinetics of restriction-modification gene expression after entry into a new host cell. Nucleic Acids Res. 2008, 36: 2581-2593.

Lintner RE, Mishra PK, Srivastava P, Martinez-Vaz BM, Khodursky AB, Blumenthal RM. Limited functional conservation of a global regulator among related bacterial genera: Lrp in Escherichia, Proteus and Vibrio. BMC Microbiology 2008, 8: 60 (26pp). doi: 10.1186/1471-2180-8-60.

Cheng X, Blumenthal RM. Mammalian DNA methyltransferases: a structural perspective. Structure 2008 ,16:  341-350.

Bazeley PS, Shepelev V, Talebizadeh Z, Butler MG, Fedorova L, Filatov V, Fedorov A. snoTARGET shows that human orphan snoRNA targets locate close to alternative splice junctions.Gene. 2008, Jan 31;408(1-2):172-9.

El-Okdi N, Smaili S, Raju V, Shidyak A, Gupta S, Fedorova L, Elkareh J, Periyasamy SM, Shapiro AP, Kahaleh MB, Malhotra D, Xie Z, Chin KV, and Shapiro JI.  “The Effects of Cardiotonic Steroids on Dermal Collagen Synthesis and Wound Healing”, J. Appl. Physiol., 2008, 105:30-36.

Toland EJ, Yerga-Woolwine S, Farms P, Cicila GT, Saad Y, Joe B. Blood pressure and proteinuria effects of multiple quantitative trait loci on rat chromosome 9 that differentiate the Spontaneously Hypertensive Rat from the Dahl Salt-sensitive rat. J. Hypertens. 2008, 26(11):2134-2141.

Chorostowska-Wynimko J, Kędzior M, Struniawski R, Gruber B, Anuszewska E, Aleem A, Jankun J. The MTT assay is not adequate for the assessment of mutated PAI-1 toxicity towards endothelial cells, Central European Journal of Immunology, 2008, 33(4).

Jankun J, Doerks T, Aleem AM, Łysiak-Szydłowska W, Skrzypczak-Jankun E. Do human Lipoxygenases have a PDZ regulatory domain? Curr Mol Med 2008. 8, 768-773, 2008, 105-107.

Aleem A, Jankun J, Dignam J, Walther M, Kühn H,  Svergun D, Skrzypczak-Jankun E. Human Platelet 12-Lipoxygenase, New Findings About Its Activity, Membrane Binding and Low Resolution Structure. J. Mol. Biol., 2008 376, 193-209.

D'Elia T, Veerapaneni R, and Rogers, SO.  Isolation of microbes from Lake Vostok accretion ice.  Appl, Environ. Microbiol. 2008, 74: 4962-4965.
           
Harris L, Rogers, SO.  Splicing by an unusually small group I ribozyme. Curr. Genet. 2008, 54:213-222.

Hulsker R, Baranova M, Bullerjahn GS, Ubbink M.  Dynamics in the transient Prochlorothrix hollandica plastocyanin-cytochrome f complex.  J. Amer. Chem. Soc. 2008, 130: 1985-1991.

Ivanikova NV,  Matteson AR, Wilhelm SW, McKay RML, Gobler CJ, Bullerjahn GS.  Picoplanktonic cyanobacteria in Lakes Superior and Erie: phylogenies of endemic populations and cultured isolates.  Vehr. Internat. Verein. Limnol. 2008, 30: 459-465.

Piunova P, Berger D, Neckers DC, Bullerjahn GS, McKay RML, Fedorov AV. Biocidal performance of acrylated glyphosate in a model photopolymerizable coating formulation. Photochem. Photobiol. Sci. 2008, 7: 1565-1569.

Xin Y, Laing C, Leontis NB, Schlick T. Annotation of tertiary interactions in RNA structures reveals variations and correlations. RNA. 2008 Dec;14(12):2465-77. Epub 2008, Oct 28.

Afonin KA, Danilov EO, Novikova IV, Leontis NB. TokenRNA: a new type of sequence-specific, label-free fluorescent biosensor for folded RNA molecules. Chembiochem. 2008, Aug 11;9(12):1902-5.

Paul L, Mishra PK, Blumenthal RM*, Matthews RG.  Integration of regulatory signals through involvement of multiple global regulators: control of the Escherichia coli gltBDF operon by Lrp, IHF, Crp, and ArgR.  BMC Microbiol. 2007 7:  1471-2180. *corresponding author

Mruk I, Rajesh PR, Blumenthal RM.  Regulatory circuit based on autogenous activation-repression: roles of C-boxes and spacer sequences in control of the PvuII restriction-modification system. Nucleic Acids Res. 2007, 35: 6935-6952.

Sarver M, Zirbel CL, Stombaugh J, Mokdad A, Leontis NB. FR3D: Finding local and composite recurrent structural motifs in RNA 3D structures. J Math Biol. 2008 Jan;56(1-2):215-52. Epub 2007, Aug 11.

Afonin KA, Cieply DJ, Leontis NB. Specific RNA self-assembly with minimal paranemic motifs. J Am Chem Soc. 2008 Jan 9;130(1):93-102. Epub 2007, Dec 12.

Mruk I, Preeti R, Blumenthal, RM. Regulatory circuit based on autogenous activation-repression: roles of C-boxes and spacer sequences
in control of the PvuII restriction-modification system. Nucleic Acids Res. 2007, doi: 10.1093/nar/gkm837.

Paul L, Mishra PK, Blumenthal RM, and Matthews, RG. Integration of regulatory signals through involvement of multiple global regulators: control of the Escherichia coli gltBDF operon by Lrp, IHF, Crp, and ArgR. BMC Microbiol. 2007, 7:2, 1471-2180.

Havlioglu N, Wang J, Fushimi K, Vibranovski MD, Kan Z, Gish W, Fedorov A, Long M, Wu JY. An intronic signal for alternative splicing in the human genome. PLoS ONE. 2007, Nov 28;2(11):e1246.

Douglas JF, Iwasawa H, Sun Z, Fedorov AV, Ishikado M, Saitoh T, Eisaki H, Bando H, Iwase T, Ino A, Arita M, Shimada K, Namatame H, Taniguchi M, Masui T, Tajima S, Fujita K, Uchida S, Aiura Y, Dessau DS. Superconductors: unusual oxygen isotope effects in cuprates? Nature. 2007, Mar 15;446(7133):E5.

Khuder S, Milz SA, Bisesi M, Vincent R, McNulty W, Czajkowski K. Health survey of residents living near farm fields permitted to receive biosolids. Arch Environ Occup Health. 2007, Jan-Feb;62(1):5-11.

Kleshinski J, Khuder SA, Shapiro JI, Gold JP. Impact of preadmission variables on USMLE step 1 and step 2 performance. Adv Health Sci Educ Theory Pract. 2007, Nov 7.

Akbar-Khanzadeh F, Milz S, Ames A, Susi PP, Bisesi M, Khuder SA, Akbar-Khanzadeh M. Crystalline silica dust and respirable particulate matter during indoor concrete grinding - wet grinding and ventilated grinding compared with uncontrolled conventional grinding. J Occup Environ Hyg. 2007, Oct;4(10):770-9.

Tietjen GE, Peterlin BL, Brandes JL, Hafeez F, Hutchinson S, Martin VT, Dafer RM, Aurora SK, Stein MR, Herial NA, Utley C, White L, Khuder SA. Depression and anxiety: effect on the migraine-obesity relationship. Headache. 2007, Jun;47(6):866-75.

Khuder SA, Milz S, Jordan T, Price J, Silvestri K, Butler P. The impact of a smoking ban on hospital admissions for coronary heart disease. Prev Med. 2007, Jul;45(1):3-8.

Ways, J.A., Smith BM, Barbato JC, Ramdath RS, Pettee KM, DeRaedt SJ, Allison DC, Koch LG, Lee SJ, Cicila GT. Congenic strains confirm aerobic running capacity quantitative trait loci on rat chromosome 16 and identify possible intermediate phenotypes. Physiol. Genomics 2007, 29:91-97.

Liao JG, Chin KV. Logistic regression for disease classification using microarray data: model selection in a large p and small n case. Bioinformatics. 2007 Aug 1;23(15):1945-51. Epub 2007, May 31.

Skrzypczak-Jankun E, Chorostowska-Wynimko J, Selman SH, Jankun J.  Lipoxygenases – a challenging problem in enzyme inhibition and drug development. Curr. Enz. Inhib. 2007, 3(2), 119-132, invited paper.

Jankun J, Aleem AM, Specht Z, Keck RW, Lysiak-Szydlowska W, Selman SH, Skrzypczak-Jankun E. PAI-1 induces cell detachment, downregulates nucleophosmin (B23) and fortilin (TCTP) in LnCAP prostate cancer cells, Int J Mol Med, 2007, 20: 11-20.

Jankun J, Aleem AM, Selman SH, Skrzypczak-Jankun E, Łysiak-Szydłowska W, Fryer H, Greenfield R. VLHL plasminogen activator inhibitor type one protects fibrin clot from tissue plasminogen activator-induced fibrinolysis, International Journal of Molecular Medicine, 2007, 20(5): 683-687.

Jankun J, Aleem A, Selman A, Skrzypczak-Jankun E, Lysiak-Szydlowska W, Grafos N, Fryer HJL, and Greenfield RS. Highly stable plasminogen activator inhibitor type one (VLHL PAI-1) protects fibrin clots from tissue plasminogen activator-mediated fibrinolysis. Int. J. Mol. Medicine, 20, 683-687, 2007.

Boyanapalli, R, Bullerjahn GS, Pohl C, Croot PL, Boyd PW, McKay RML. A luminescent whole-cell cyanobacterial bioreporter for measuring Fe availability in diverse marine environments.  Appl. Environ. Microbiol. 2007, 73: 1019-1024.

Ivanikova NV, McKay RML, Bullerjahn GS, Sterner RW. Nitrate utilization in Lake Superior is impaired by low nutrient (P, Fe) availability and seasonal light limitation – a cyanobacterial bioreporter study. J. Phycol. 2007, 43: 475-484.

Sterner RW, Brovold S, Bullerjahn GS, Finlay J, Kumar S, McKay RML, Sherrell R.  Increasing stoichiometric imbalance in Earth’s largest lake: the nitrifying of Lake Superior. Geophys. Res. Lett. 2007, 34: L10406.

Ivanikova NV, Popels L, McKay RML, Bullerjahn GS. North America’s largest lake supports unique clusters of cyanobacterial picoplankton.  Appl. Environ. Microbiol. 2007, 73: 4055-4066. (cover article)

Colakerol L, Veal TD, Jeong HK, Plucinski L, Demasi A, Learmonth T, Glans PA, Wang S, Zhang Y, Piper LF, Jefferson PH, Fedorov A, Chen TC, Moustakas TD, McConville CF, Smith KE. Quantized electron accumulation States in indium nitride studied by angle-resolved photoemission spectroscopy. Phys Rev Lett. 2006, Dec 8; 97(23):237601.

Shepelev V, Fedorov A. Advances in the Exon-Intron Database (EID). Brief Bioinform. 2006, Jun;7(2):178-85.

Shao X, Shepelev V, Fedorov A. Bioinformatic analysis of exon repetition, exon scrambling and trans-splicing in humans. Bioinformatics. 2006, Mar 15;22(6):692-8.

Fedorov A, Fedorova L. Where is the difference between the genomes of humans and annelids? Genome Biol. 2006, 7(1):203.

Kennedy DJ, Burket MW, Khuder SA, Shapiro JI, Topp RV, Cooper CJ. Quality of life improves after renal artery stenting. Biol Res Nurs. 2006, Oct;8(2):129-37.

Pirzada Y, Khuder S, Donabedian H. Predicting AIDS-related events using CD4 percentage or CD4 absolute counts. AIDS Res Ther. 2006, Aug 17;3:20.

Shriner AK, Smithson SL, Rabquer B, Khuder S, Westerink MA. Analysis of the young and elderly variable gene repertoire in response to pneumococcal polysaccharides using a reconstituted SCID mouse model. Vaccine. 2006, Nov 30;24(49-50):7159-66.

Shriner AK, Smithson SL, Prinz DM, Rabquer B, Khuder S, Goomber R, Westerink MA. Comparison of the human immune response to conjugate and polysaccharide pneumococcal vaccination using a reconstituted SCID mouse model. Vaccine. 2006, Nov 30;24(49-50):7197-203.

Needham PG, Trumbly RJ. In vitro characterization of the Mig1 repressor from Saccharomyces cerevisiae reveals evidence for monomeric and higher molecular weight forms. Yeast. 2006, Dec;23(16):1151-66.

Liang L, Chen J, Vittal R, Selvanayagam ZE, McAteer J, Deng L, Tischfield J, Chin K-V, and Sahota A. "Expression profiling of crystal-induced injury in human kidney epithelial cells", Nephron Physiol., 2006, 103:53-62.

Lee, S.J., Liu J, Westcott A, Vieth J, DeRaedt S, Yang S, Joe B, Cicila GT. Substitution mapping in Dahl rats identifies two distinct blood pressure Quantitative Trait Loci within 1.12 Mb and 1.25 Mb intervals on Chromosome 3. Genetics 2006, 174:2203-2213.

Nestor AL, Cicila GT, Karol AE, Langenderfer KM, Hollopeter SL, Allison DC. Linkage analysis of neointimal hyperplasia and vascular wall changes following balloon angioplasty. Physiol. Genomics 2006, 25:286-293.

Zaim A, Jankun J. An edge-based segmentation for prostate ultrasound images using phase symmetry. IEEE International Conference on Signal Analysis and Processing. 2006, 1, 297-300.

McCabe NP, Selman SH, Jankun J. Vascular endothelial growth factor production in human prostate cancer cells is stimulated by overexpression of platelet 12-Lipoxygenase. The Prostate, 2006, 66 (7), 779-787.

Jankun J, Specht Z, Szkudlarek M, Greenfield R, Gaikwad B, Trifonov L, Vaugeois J, Aleem AM, Basrur V, Selman SH, Zavodszky IM, Skrzypczak-Jankun E. Plasminogen sctivator inhibitor-1 is locked in active conformation and polymerizes upon binding ligands neutralizing its activity, International Journal of Molecular Medicine, 2006, 17 (3), 437-447, (on the cover)

Skrzypczak-Jankun E, Borbulevych YO, Zavodszky MI, Baranski MR, Padmanabhan K, Petricek V, Jankun, J. Effect of crystal freezing and small-molecule binding on internal cavity size in a large protein: X-ray and docking studies of lipoxygenase at ambient and low temperature at 2.0 A resolution, Acta Crystallogr D Biol Crystallogr, 2006, 62, Pt7, 766-775.

Jankun J, Aleem, AM, Malgorzewicz S, Szkudlarek M, Zavodszky MI, Dewitt DL, Feig, M, Selman SH, Skrzypczak-Jankun E. Synthetic curcuminoids modulate the arachidonic acid metabolism of human platelet 12-Lipoxygenase and reduce sprout formation of human endothelial cells. Molecular Cancer Therapeutics, 2006, (5), 1371-1382, (on the cover).

Jankun J, Selman SH, Aniola J, Skrzypczak-Jankun E. Nutraceutical inhibitors of urokinase: Potential applications in prostate cancer prevention and treatment. Oncology Reports,  2006, 16, 341-346

Slama JT, Mehta N, Skrzypczak-Jankun E. Carbocyclic ribosyl amines: Synthesis of 5-substituted carbocyclic ß-ribofuranosylamines. J. Org. Chem. 71, 7877-7880, 2006.

Skrzypczak-Jankun E, Slama J, Mehta N, (4-(1,3-dioxoisoindolin-2-yl)-2,3,5-trihydro-cyclopentyI)menthyl acetate Cambridge Crystallographic Data Centre, deposition no. CCDC 2006, 606910.

Shoham D, Rogers, SO.  Greenland as a plausible springboard for trans-Atlantic avian influenza spread.  Med. Hypoth., 2006, 67:1460-1461.

Rogers SO, Kaya, Z.  DNA from ancient cedar wood from King Midas' tomb, Turkey, and Al-Aksa Mosque, Israel.  Silvae Genet. 2006, 55:54-62.
          
Zhang G, Shoham D, Gilichinsky D, Davydov S, Castello JD, Rogers SO.  Evidence for influenza A virus RNA in Siberian lake ice. J. Virol., 2006, 80:12229-12235.

Anula HM, Guliaev A, Myshkin E, Danilov E, Bullerjahn GS, Rodgers MAJ.  Photoprocesses in self-assembled cationic porphyrins and plastocyanin complexes I: Ligation of plastocyanin tyrosine 83 onto metalloporphyrins and electron transfer fluorescence quenching.  J. Phys. Chem. (part A) 2006, 110: 2545-2559.

Hassler CS, Twiss MR, McKay RML, Bullerjahn GS. Optimization of a cyanobacterial (Synechococcus sp. PCC 7942) bioreporter to measure bioavailable iron.   J. Phycol. 2006, 42: 324-335.

Gouvêa SP, Melendez C, Carberry M, Wilhelm SW, Bullerjahn GS, Langen TA,  Twiss MR.  Assessment of phosphorus-microbe interactions in Lake Ontario by multiple techniques.  J. Great Lakes Res. 2006, 32: 455-470.

Wilhelm SW, Bullerjahn GS, Rinta-Kanto JM, Eldridge ML, Bourbonniere RA.   Seasonal hypoxia and the genetic diversity of prokaryote populations in the central basin hypolimnion of Lake Erie: evidence for abundant picocyanobacteria and photosynthesis. J. Great Lakes Res. 2006 32: 657-671.

Afonin KA, Leontis NB. Generating new specific RNA interaction interfaces using C-loops.  J Am Chem Soc. 2006, Dec 20;128(50):16131-7.

Mokdad A, Leontis NB. Ribostral: an RNA 3D alignment analyzer and viewer based on basepair isostericities. Bioinformatics. 2006, Sep 1;22(17):2168-70. Epub 2006 Jul 4.PMID: 16820430.

Leontis NB, Lescoute A, Westhof E. The building blocks and motifs of TNA architecture. Curr Opin Struct Biol. 2006, Jun;16(3):279-87. Epub 2006 May 19. Review.PMID: 16713707.

Nasalean L, Baudrey S, Leontis NB, Jaeger L. Controlling RNA self-assembly to form filaments. Nucleic Acids Res. 2006, Mar 6;34(5):1381-92. Print 2006.PMID: 16522648.

Mokdad A, Krasovska MV, Sponer J, Leontis NB. Structural and evolutionary classification of G/U wobble basepairs in the ribosome. Nucleic Acids Res. 2006, Mar 6;34(5):1326-41. Print 2006, PMID: 16522645.

Leontis NB, Altman RB, Berman HM, Brenner SE, Brown JW, Engelke DR, Harvey SC, Holbrook SR, Jossinet F, Lewis SE, Major F, Mathews DH, Richardson JS, Williamson JR, Westhof E. The RNA Ontology Consortium: an open invitation to the RNA community. RNA. 2006 Apr;12(4):533-41. Epub 2006, Feb 16.