Program in Bioinformatics & Proteomics/Genomics

/med/depts/bioinfo/

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/med/depts/bioinfo/

Contact Us

Health Science Campus
Health Education Building & Center for Creative Education Building

BPG Computer Classroom: HEB 1st Floor, Room #127
Genomic Core Lab: HEB 2nd Floor, Room #200

BPG Office: CCE 3rd Floor, Lobby
Phone: 419.383.6883
Fax: 419.383.3251

webmaster@utoledo.edu

Genomic Mid-Range Inhomogeneity

Genomic Mid-Range Inhomogeneity (MRI) program package
(version 1.0 of Genomic-MRI is available at: http://mco321125.meduohio.edu/~jbechtel/gmri/)

 
Submitted manuscript: Genomic mid-range inhomogeneity impacts RNA secondary structures by Bechtel et al. 2007.

Sequence samples described in the paper were obtained from human Exon-Intron Database, release hs35p1.EID, (Shepelev & Fedorov Briefings in Bioinformatics 2006, 7: 178-185.)

Download the samples:

11,315 non-redundant human mRNAs ( mRNA_purged )

Introns from 11,315 genes mRNAs ( introns_purged2 )

Intergenic regions from human Chr 17  

Additional File 1 Additional File 2 
   


Exon-Intron Database (EID)          

Page updated: June 11, 2008

 

This material is based upon work supported by the National Science Foundation under Grant No. 0643542. Any opinions, findings and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation (NSF).

Last Updated: 3/22/15